Type
org
Skills
8
Claimed
No
Verified
No
Review boundary
Author information helps you judge provenance; different skills from the same author may still have different source states, so review each one before install.
Published skills
Inspect each skill on the cards before install.
Repository: dna-seq-gatk-variant-calling
Author: snakemake-workflows · Source status: Clear source
This Snakemake pipeline implements the GATK best-practices workflow
Score basis：Clear source · Risk needs review · Universal
Repository: snakemake-workflow-template
Author: snakemake-workflows · Source status: Clear source
A template for standard compliant snakemake-workflows
Score basis：Clear source · Risk needs review · Universal
Repository: docs
Author: snakemake-workflows · Source status: Clear source
Documentation of the Snakemake-Workflows project
Score basis：Clear source · Risk needs review · Universal
Repository: single-cell-rna-seq
Author: snakemake-workflows · Source status: Clear source
A single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.
Score basis：Clear source · Risk needs review · Universal
Repository: dna-seq-varlociraptor
Author: snakemake-workflows · Source status: Clear source
A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/normal, tumor/normal/relapse, germline, pedigree, populations) via the unified statistical model of Varlociraptor.
Score basis：Clear source · Risk needs review · Universal
Repository: rna-seq-kallisto-sleuth
Author: snakemake-workflows · Source status: Clear source
A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.
Score basis：Clear source · Risk needs review · Universal
Repository: dna-seq-benchmark
Author: snakemake-workflows · Source status: Clear source
A snakemake workflow for benchmarking variant calling approaches with Genome in a Bottle (GIAB), CHM (syndip) or other custom datasets
Score basis：Clear source · Risk needs review · Universal
